Best TWAS P=3.22e-12 · Best GWAS P=2.68e-10 conditioned to NaN
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | B3gntl1 | alternative polyA | XM_039086513.1 | 0.04 | 1087 | 0.01 | 3.0e-02 | -5.87 | 4.36e-09 | 0.09 | FALSE |
| Adipose | B3gntl1 | alternative polyA | XM_039086513.1 | 0.04 | 1087 | 0.02 | 5.0e-03 | -5.8 | 6.59e-09 | 0.05 | TRUE |
| Adipose | Dus1l | alternative TSS | XM_006247875.3 | 0.02 | 55 | 0.01 | 3.9e-02 | -6.89 | 5.48e-12 | 0.01 | FALSE |
| Adipose | Dus1l | alternative TSS | NM_172018.2 | 0.02 | 8 | 0 | 1.1e-01 | 6.17 | 6.74e-10 | 0.01 | FALSE |
| Adipose | Dus1l | alternative TSS | XM_006247875.3 | 0.02 | 10 | 0 | 8.7e-02 | -6.28 | 3.32e-10 | 0.01 | TRUE |
| Adipose | Wdr45b | isoform ratio | NM_001039587.1 | 0.12 | 1 | 0.07 | 2.2e-08 | 5.92 | 3.28e-09 | 0.8 | FALSE |
| Adipose | Wdr45b | isoform ratio | XM_039086445.1 | 0.04 | 1 | 0.01 | 2.4e-02 | -5.92 | 3.28e-09 | 0.18 | FALSE |
| BLA | Sectm1a | gene expression | Sectm1a | 0.13 | 1 | 0.1 | 3.9e-06 | 5.69 | 1.29e-08 | 0.26 | TRUE |
| Brain | Lrrc45 | alternative TSS | XM_039086852.1 | 0.15 | 49 | 0.05 | 2.3e-05 | 5.37 | 7.81e-08 | 0 | TRUE |
| Brain | Fn3k | gene expression | Fn3k | 0.08 | 1 | 0.05 | 1.1e-05 | -5.75 | 9.13e-09 | 0.54 | FALSE |
| Eye | Narf | gene expression | Narf | 0.32 | 25 | 0.09 | 1.6e-02 | -5.32 | 1.06e-07 | 0.38 | FALSE |
| LHb | B3gntl1 | alternative TSS | XM_039086520.1 | 0.38 | 36 | 0.11 | 1.3e-03 | -6.81 | 9.80e-12 | 0.67 | TRUE |
| OFC | Rab40b | gene expression | Rab40b | 0.33 | 11 | 0.06 | 1.8e-02 | 5.61 | 2.05e-08 | 0.67 | TRUE |
| pVTA | Foxk2 | isoform ratio | NM_001107075.1 | 0.29 | 1721 | 0.03 | 1.3e-02 | -6.97 | 3.22e-12 | 0.46 | TRUE |