Best TWAS P=4.64e-10 · Best GWAS P=1.22e-06 conditioned to 3.04e-03
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Jade1 | gene expression | ENSRNOG00000014066 | 0.13 | 1263 | 0.04 | 4.2e-05 | 5.82 | 5.86e-09 | 0.44 | FALSE |
Brain | Jade1 | alternative polyA | ENSRNOT00000018872 | 0.2 | 116 | 0.09 | 1.3e-08 | 6.23 | 4.64e-10 | 0.21 | TRUE |
Brain | Jade1 | alternative polyA | ENSRNOT00000100298 | 0.2 | 115 | 0.09 | 1.5e-08 | -6.17 | 6.88e-10 | 0.21 | FALSE |
Brain | Larp1b | alternative TSS | ENSRNOT00000044804 | 0.06 | 31 | 0.03 | 3.7e-04 | 6.13 | 8.85e-10 | 0.54 | FALSE |
Brain | Jade1 | isoform ratio | ENSRNOT00000018872 | 0.08 | 39 | 0.01 | 3.0e-02 | 6.22 | 4.86e-10 | 0.12 | FALSE |
Brain | Jade1 | isoform ratio | ENSRNOT00000100298 | 0.22 | 107 | 0.09 | 9.3e-09 | -5.71 | 1.12e-08 | 0.2 | FALSE |
Brain | Larp1b | isoform ratio | ENSRNOT00000044804 | 0.09 | 36 | 0.05 | 1.2e-05 | 6.18 | 6.46e-10 | 0.6 | FALSE |
Brain | RGD1359508 | mRNA stability | ENSRNOG00000038330 | 0.11 | 99 | 0.12 | 3.5e-11 | -5.14 | 2.76e-07 | 0.56 | FALSE |
Liver | RGD1565989 | gene expression | ENSRNOG00000013940 | 0.09 | 37 | 0.02 | 1.1e-03 | -5.41 | 6.26e-08 | 0.35 | FALSE |