Best TWAS P = 1.39e-08 · Best GWAS P= 2.76e-06 conditioned to 7.79e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| NAcc | Lmo1 | alternative TSS | NM_139112.3 | 0.02 | 1083 | 0.01 | 9.3e-03 | -5.51 | 3.60e-08 | 0.47 | FALSE |
| NAcc | Lmo1 | alternative TSS | XM_063280885.1 | 0.02 | 1083 | 0.01 | 2.9e-03 | 5.37 | 7.76e-08 | 0.28 | FALSE |
| OFC | Ric3 | alternative TSS | NM_001277069.1 | 0.19 | 1202 | 0.07 | 1.1e-02 | 5.44 | 5.24e-08 | 0.35 | FALSE |
| OFC | Ric3 | alternative TSS | XM_063274190.1 | 0.18 | 187 | 0.07 | 8.9e-03 | 5.23 | 1.74e-07 | 0.35 | FALSE |
| PL | Ric3 | alternative TSS | XM_063274190.1 | 0.1 | 49 | 0.09 | 1.0e-09 | 5.67 | 1.39e-08 | 0.22 | TRUE |
| PL | Eif3f | mRNA stability | Eif3f | 0.03 | 1817 | 0.02 | 3.5e-03 | -5.35 | 8.97e-08 | 0.32 | FALSE |