Hub : Traits : BMI with tail : ← : →

chr1:201,865,024-205,361,167

Trait: BMI with tail

Best TWAS P=1.97e-09 · Best GWAS P=1.08e-08 conditioned to 2.99e-01

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Ccdc85b	gene expression	Ccdc85b	0.04	1	0.02	1.0e-03	5.31	1.09e-07	0.34	FALSE
Adipose	Ehbp1l1	gene expression	Ehbp1l1	0.31	1415	0.21	1.7e-22	-5.57	2.61e-08	0.57	FALSE
Adipose	Fosl1	gene expression	Fosl1	0.08	43	0.05	5.7e-06	5.35	8.94e-08	0.86	FALSE
Adipose	Naaladl1	gene expression	Naaladl1	0.22	1	0.15	1.8e-16	-5.37	8.04e-08	0.76	FALSE
Adipose	Ovol1	gene expression	Ovol1	0.12	1327	0.04	4.3e-05	-5.29	1.25e-07	0.38	FALSE
Adipose	Pcnx3	gene expression	Pcnx3	0.13	1	0.09	5.9e-10	-5.31	1.09e-07	0.71	FALSE
Adipose	Cox8a	mRNA stability	Cox8a	0.04	1339	0.02	5.4e-03	5.27	1.35e-07	0.58	FALSE
Adipose	Rpl37-ps2	mRNA stability	Rpl37-ps2	0.09	22	0.05	5.0e-06	-5.53	3.22e-08	0.82	FALSE
Adipose	Scyl1	mRNA stability	Scyl1	0.15	1	0.1	1.9e-11	5.42	6.09e-08	0.8	FALSE
BLA	Fermt3	alternative polyA	XM_006230811.4	0.1	1	0	2.1e-01	-5.24	1.57e-07	0.05	FALSE
BLA	Fermt3	alternative polyA	XM_039079706.1	0.11	1	0	1.8e-01	5.24	1.57e-07	0.05	FALSE
BLA	Snx32	alternative polyA	XM_039094858.1	0.08	1306	0.07	8.7e-05	5.41	6.17e-08	0.66	FALSE
BLA	Kcnk4	alternative TSS	XM_008760056.3	0.13	1364	0.08	3.9e-05	-5.36	8.41e-08	0.84	FALSE
BLA	Capn1	gene expression	Capn1	0.24	4	0.13	1.2e-07	-5.43	5.67e-08	0.67	FALSE
BLA	Kcnk4	gene expression	Kcnk4	0.36	1364	0.26	4.2e-14	5.37	7.72e-08	0.86	FALSE
BLA	Naaladl1	gene expression	Naaladl1	0.71	1	0.52	6.3e-32	-5.42	6.09e-08	0.81	FALSE
BLA	Ovol1	gene expression	Ovol1	0.25	1327	0.13	1.1e-07	-5.37	7.99e-08	0.88	FALSE
BLA	Rps6ka4	gene expression	Rps6ka4	0.43	224	0.25	7.5e-14	-5.35	9.02e-08	0.87	FALSE
BLA	Snx15	gene expression	Snx15	0.12	117	0.07	1.7e-04	5.51	3.68e-08	0.73	FALSE
BLA	Kcnk4	isoform ratio	XM_008760056.3	0.12	1	0.1	8.3e-06	5.44	5.31e-08	0.55	FALSE
BLA	Rtn3	isoform ratio	NM_001009953.3	0.16	39	0.11	1.0e-06	-5.22	1.76e-07	0.82	FALSE
Brain	Snx32	alternative polyA	XM_039094858.1	0.08	1	0.07	2.0e-07	-5.46	4.67e-08	0.88	FALSE
Brain	Snx32	alternative polyA	XM_039094864.1	0.12	1	0.11	1.9e-10	5.61	2.03e-08	0.95	FALSE
Brain	Kcnk4	alternative TSS	XM_008760056.3	0.18	5	0.13	1.1e-11	-5.76	8.34e-09	0.86	FALSE
Brain	Kcnk4	gene expression	Kcnk4	0.33	11	0.26	3.6e-24	-5.77	7.73e-09	0.86	FALSE
Brain	Naaladl1	gene expression	Naaladl1	0.73	26	0.56	4.1e-62	5.64	1.69e-08	0.76	FALSE
Brain	Rps6ka4	gene expression	Rps6ka4	0.08	1	0.04	9.7e-05	-5.44	5.31e-08	0.3	FALSE
Brain	Sac3d1	gene expression	Sac3d1	0.15	1636	0.06	3.2e-06	5.25	1.56e-07	0.84	FALSE
Brain	Snx15	gene expression	Snx15	0.21	71	0.17	1.2e-15	5.59	2.31e-08	0.74	FALSE
Brain	Snx32	gene expression	Snx32	0.14	147	0.11	1.8e-10	5.41	6.13e-08	0.72	FALSE
Brain	Kcnk4	isoform ratio	XM_008760056.3	0.17	5	0.12	3.6e-11	-5.81	6.39e-09	0.85	FALSE
Brain	Snx32	isoform ratio	XM_341993.9	0.07	1306	0.07	6.8e-07	-5.44	5.33e-08	0.67	FALSE
Brain	Rpl37-ps2	intron excision ratio	chr1_202839369_202840008	0.13	10	0.08	3.4e-08	-5.5	3.85e-08	0.72	FALSE
Brain	Rpl37-ps2	intron excision ratio	chr1_202839369_202855817	0.12	2	0.11	2.9e-10	-5.2	1.97e-07	0.72	FALSE
Brain	Cox8a	mRNA stability	Cox8a	0.12	10	0.1	9.2e-10	-5.79	7.10e-09	0.89	FALSE
Brain	Kcnk4	mRNA stability	Kcnk4	0.12	6	0.07	1.7e-07	-5.71	1.12e-08	0.82	FALSE
Brain	Rpl37-ps2	mRNA stability	Rpl37-ps2	0.33	142	0.22	1.5e-20	5.56	2.63e-08	0.72	FALSE
Brain	Snx32	mRNA stability	Snx32	0.06	1	0.04	6.2e-05	5.39	7.04e-08	0.49	FALSE
Eye	Kcnk4	gene expression	Kcnk4	0.53	10	0.09	1.8e-02	5.73	1.03e-08	0.13	FALSE
IL	Naaladl1	gene expression	Naaladl1	0.67	1	0.21	9.4e-06	-5.22	1.78e-07	0.18	FALSE
IL	Ovol1	gene expression	Ovol1	0.33	1	0.14	3.6e-04	5.39	6.87e-08	0.09	FALSE
IL	Rps6ka4	gene expression	Rps6ka4	0.19	304	0.08	5.0e-03	-5.5	3.76e-08	0.32	FALSE
LHb	Fermt3	alternative TSS	NM_001127543.1	0.2	75	0.12	9.0e-04	-5.21	1.90e-07	0.02	FALSE
LHb	Flrt1	gene expression	Flrt1	0.4	1	0.19	3.2e-05	5.36	8.38e-08	0.08	FALSE
LHb	Naaladl1	gene expression	Naaladl1	0.2	54	0.11	1.3e-03	-5.39	7.13e-08	0.56	FALSE
LHb	Snx15	gene expression	Snx15	0.72	5	0.12	7.2e-04	-5.32	1.06e-07	0.6	FALSE
Liver	Otub1	gene expression	Otub1	0.33	22	0.23	2.1e-25	-5.54	3.00e-08	0.88	FALSE
Liver	Macrod1	mRNA stability	Macrod1	0.06	1	0.04	5.2e-05	5.45	4.96e-08	0.28	FALSE
Liver	Pcnx3	mRNA stability	Pcnx3	0.05	1404	0.02	1.2e-03	-5.68	1.36e-08	0.82	FALSE
NAcc	Syvn1	alternative TSS	XM_006230852.4	0.02	7	0.01	6.5e-03	5.61	1.97e-08	0.62	FALSE
NAcc	Naaladl1	gene expression	Naaladl1	0.67	19	0.49	1.5e-64	5.42	6.12e-08	0.76	FALSE
NAcc	Sac3d1	gene expression	Sac3d1	0.39	1	0.25	6.2e-29	-5.43	5.64e-08	0.82	FALSE
NAcc	Macrod1	isoform ratio	NM_139337.2	0.03	1347	0.02	3.8e-03	-5.2	1.99e-07	0.7	FALSE
NAcc	Snx32	isoform ratio	XM_039094858.1	0.12	1306	0.11	1.9e-12	5.21	1.92e-07	0.57	FALSE
NAcc	Rpl37-ps2	intron excision ratio	chr1_202839369_202840008	0.08	1	0.05	4.2e-06	-5.34	9.11e-08	0.78	FALSE
NAcc	Rpl37-ps2	intron excision ratio	chr1_202839369_202855814	0.04	1313	0.02	4.3e-03	-5.37	7.74e-08	0.77	FALSE
NAcc	Naaladl1	mRNA stability	Naaladl1	0.06	33	0.06	4.5e-07	-5.95	2.73e-09	0.79	FALSE
NAcc	Otub1	mRNA stability	Otub1	0.08	1	0.06	1.6e-07	-5.31	1.08e-07	0.71	FALSE
NAcc	Rpl37-ps2	mRNA stability	Rpl37-ps2	0.12	62	0.12	1.2e-13	5.61	2.02e-08	0.67	FALSE
OFC	Kcnk4	gene expression	Kcnk4	0.34	24	0.13	4.5e-04	5.36	8.46e-08	0.58	FALSE
OFC	Naaladl1	gene expression	Naaladl1	0.61	1	0.25	1.3e-06	-5.22	1.78e-07	0.12	FALSE
OFC	Ovol1	gene expression	Ovol1	0.34	1	0.17	6.3e-05	5.21	1.84e-07	0.07	FALSE
PL	Macrod1	alternative polyA	XM_039099901.1	0.05	1	0.02	1.6e-03	-5.72	1.08e-08	0.22	FALSE
PL	Naa40	alternative polyA	NM_001108518.1	0.06	1	0.05	3.6e-06	-5.4	6.72e-08	0.68	FALSE
PL	Naa40	alternative polyA	XM_039084082.1	0.06	1	0.05	1.7e-06	5.4	6.72e-08	0.73	FALSE
PL	Naa40	alternative polyA	NM_001108518.1	0.06	1	0.05	2.6e-06	-5.4	6.72e-08	0.71	FALSE
PL	Naa40	alternative polyA	XM_039084072.1	0.06	1	0.05	1.5e-06	5.4	6.72e-08	0.74	FALSE
PL	Arl2	alternative TSS	XM_006230899.3	0.03	1	0.01	8.7e-03	5.42	6.09e-08	0.04	FALSE
PL	Kcnk4	alternative TSS	XM_008760056.3	0.12	6	0.11	8.6e-12	-5.59	2.22e-08	0.87	FALSE
PL	Kcnk4	alternative TSS	NM_053804.3	0.13	1364	0.1	1.4e-10	5.21	1.86e-07	0.88	FALSE
PL	Kcnk4	alternative TSS	XM_008760055.3	0.12	1364	0.09	2.4e-10	-5.22	1.81e-07	0.88	FALSE
PL	Catsperz	gene expression	Catsperz	0.05	1	0.02	2.8e-03	-5.29	1.19e-07	0.09	FALSE
PL	Efemp2	gene expression	Efemp2	0.05	1	0.05	4.0e-06	-5.39	7.04e-08	0.88	FALSE
PL	Kcnk4	gene expression	Kcnk4	0.19	1364	0.14	1.9e-15	5.49	4.10e-08	0.86	FALSE
PL	Naaladl1	gene expression	Naaladl1	0.67	46	0.51	2.1e-65	5.45	5.07e-08	0.76	FALSE
PL	Ovol1	gene expression	Ovol1	0.31	14	0.28	3.0e-31	-5.46	4.77e-08	0.7	FALSE
PL	Pcnx3	gene expression	Pcnx3	0.06	65	0.04	5.4e-05	-6	1.97e-09	0.83	TRUE
PL	Rps6ka4	gene expression	Rps6ka4	0.18	1	0.12	2.7e-13	-5.53	3.16e-08	0.89	FALSE
PL	Yif1a	gene expression	Yif1a	0.05	1	0.03	1.4e-04	5.34	9.11e-08	0.82	FALSE
PL	Kcnk4	isoform ratio	XM_008760056.3	0.1	4	0.09	2.2e-10	-5.49	4.07e-08	0.84	FALSE
PL	Snx32	isoform ratio	XM_341993.9	0.02	1306	0.02	2.6e-03	-5.3	1.19e-07	0.53	FALSE
PL	Kcnk4	intron excision ratio	chr1_204120828_204124788	0.04	1	0.02	1.2e-03	-5.29	1.21e-07	0.11	FALSE
PL	Nrxn2	intron excision ratio	chr1_203763525_203780407	0.03	1	0.01	2.5e-02	5.45	4.96e-08	0.07	FALSE
PL	Rpl37-ps2	intron excision ratio	chr1_202839369_202840008	0.32	28	0.22	9.2e-24	5.26	1.45e-07	0.73	FALSE
PL	Scyl1	mRNA stability	Scyl1	0.04	1	0.02	1.5e-03	-5.38	7.54e-08	0.12	FALSE
pVTA	Snx32	alternative polyA	XM_039094829.1	0.1	1306	0.05	4.1e-03	5.38	7.41e-08	0.65	FALSE
pVTA	Snx32	alternative polyA	XM_341993.9	0.15	1	0.09	9.0e-05	5.18	2.27e-07	0.19	FALSE
pVTA	Fosl1	gene expression	Fosl1	0.41	128	0.21	1.4e-09	5.19	2.06e-07	0.82	FALSE
pVTA	Naaladl1	gene expression	Naaladl1	0.45	1	0.25	3.3e-11	-5.68	1.36e-08	0.95	FALSE
pVTA	Snx15	gene expression	Snx15	0.56	11	0.2	6.8e-09	-5.41	6.19e-08	0.79	FALSE
pVTA	Snx32	gene expression	Snx32	0.14	1	0.05	2.3e-03	-5.61	2.03e-08	0.61	FALSE
pVTA	Rpl37-ps2	intron excision ratio	chr1_202839369_202840008	0.15	1313	0.07	4.6e-04	5.24	1.65e-07	0.82	FALSE
pVTA	Rpl37-ps2	intron excision ratio	chr1_202839369_202855817	0.17	1	0.16	2.2e-07	5.18	2.18e-07	0.48	FALSE
RMTg	Znrd2	isoform ratio	NM_001109537.2	0.25	54	0.13	2.3e-04	-5.38	7.65e-08	0.68	FALSE
RMTg	Sipa1	mRNA stability	Sipa1	0.16	1376	0.1	1.7e-03	-5.29	1.25e-07	0.52	FALSE