Best TWAS P = 1.11e-07 · Best GWAS P= 7.31e-06 conditioned to 3.89e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| NAcc | Lmo1 | alternative TSS | NM_139112.3 | 0.02 | 1083 | 0.01 | 9.3e-03 | -5.31 | 1.11e-07 | 0.26 | TRUE |
| NAcc | Lmo1 | alternative TSS | XM_063280885.1 | 0.02 | 1083 | 0.01 | 2.9e-03 | 5.29 | 1.25e-07 | 0.31 | FALSE |
| NAcc | Eif3f | mRNA stability | Eif3f | 0.03 | 54 | 0.02 | 3.2e-04 | -5.23 | 1.67e-07 | 0.44 | FALSE |
| OFC | Ric3 | alternative TSS | NM_001277069.1 | 0.19 | 1202 | 0.07 | 1.1e-02 | 5.3 | 1.16e-07 | 0.28 | FALSE |
| PL | Tub | gene expression | Tub | 0.06 | 1534 | 0.02 | 1.1e-03 | 5.22 | 1.81e-07 | 0.52 | FALSE |
| PL | Eif3f | mRNA stability | Eif3f | 0.03 | 1817 | 0.02 | 3.5e-03 | -5.3 | 1.15e-07 | 0.26 | FALSE |