chr1:201,865,024-205,361,167

Trait: BMI with tail

Best TWAS P=7.15e-09 · Best GWAS P=1.08e-08 conditioned to NaN

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose Drap1 gene expression ENSRNOG00000020527 0.1 1 0.05 1.8e-06 5.31 1.09e-07 0.91 FALSE
Adipose Fosl1 gene expression ENSRNOG00000020552 0.11 1189 0.03 2.0e-04 -5.34 9.29e-08 0.87 FALSE
Adipose Pcnx3 gene expression ENSRNOG00000020742 0.15 1 0.09 3.6e-10 5.31 1.09e-07 0.71 FALSE
Adipose Naaladl1 gene expression ENSRNOG00000021000 0.23 1 0.16 9.0e-18 5.37 8.04e-08 0.76 FALSE
Adipose Fermt3 gene expression ENSRNOG00000021161 0.04 1 0.03 6.4e-04 -5.42 5.84e-08 0.06 FALSE
Adipose Cdca5 gene expression ENSRNOG00000046635 0.07 1 0.04 7.6e-05 -5.42 5.84e-08 0.5 FALSE
Adipose Ehbp1l1 gene expression ENSRNOG00000056038 0.32 1413 0.21 1.9e-23 -5.62 1.90e-08 0.8 FALSE
Adipose Ccdc85b gene expression ENSRNOG00000070266 0.03 1 0.01 1.1e-02 -5.31 1.09e-07 0.06 FALSE
Adipose Snx32 isoform ratio ENSRNOT00000096559 0.05 1299 0.03 3.0e-04 5.15 2.55e-07 0.65 FALSE
Adipose Znrd2 intron excision ratio chr1:203018382:203018914 0.05 1413 0.01 1.4e-02 5.09 3.53e-07 0.48 FALSE
Adipose Scyl1 mRNA stability ENSRNOG00000023668 0.15 1 0.1 2.8e-11 -5.42 6.09e-08 0.8 FALSE
BLA Ovol1 gene expression ENSRNOG00000020669 0.23 22 0.14 1.0e-07 -5.79 7.15e-09 0.89 TRUE
BLA Naaladl1 gene expression ENSRNOG00000021000 0.7 1 0.51 4.3e-31 5.42 6.09e-08 0.81 FALSE
BLA Rps6ka4 gene expression ENSRNOG00000021117 0.39 199 0.25 1.3e-13 5.59 2.33e-08 0.87 FALSE
BLA Kcnk4 gene expression ENSRNOG00000021140 0.33 1370 0.21 1.1e-11 5.29 1.24e-07 0.86 FALSE
BLA Ehbp1l1 gene expression ENSRNOG00000056038 0.09 1 0.05 1.3e-03 5.3 1.13e-07 0.13 FALSE
BLA Naaladl1 isoform ratio ENSRNOT00000054835 0.09 1618 0.06 5.8e-04 -5.24 1.59e-07 0.69 FALSE
BLA Naaladl1 isoform ratio ENSRNOT00000095018 0.08 1618 0.06 6.8e-04 5.26 1.46e-07 0.68 FALSE
BLA Otub1 isoform ratio ENSRNOT00000114563 0.24 3 0.17 2.9e-09 -5.72 1.04e-08 0.86 FALSE
BLA Spindoc isoform ratio ENSRNOT00000034477 0.07 1 0.04 5.2e-03 5.28 1.27e-07 0.1 FALSE
BLA Spindoc isoform ratio ENSRNOT00000083157 0.08 1 0.05 1.8e-03 -5.28 1.27e-07 0.12 FALSE
BLA Ehbp1l1 isoform ratio ENSRNOT00000077526 0.06 1413 0.04 1.9e-03 -5.58 2.39e-08 0.6 FALSE
BLA Nrxn2 intron excision ratio chr1:203802213:203813559 0.08 1 0.03 9.7e-03 -5.35 8.81e-08 0.06 FALSE
Brain Fosl1 gene expression ENSRNOG00000020552 0.22 112 0.16 2.4e-14 -5.11 3.31e-07 0.88 FALSE
Brain Ovol1 gene expression ENSRNOG00000020669 0.23 1323 0.13 1.8e-12 -5.23 1.71e-07 0.7 FALSE
Brain Pcnx3 gene expression ENSRNOG00000020742 0.11 1 0.09 8.6e-09 5.26 1.47e-07 0.64 FALSE
Brain Naaladl1 gene expression ENSRNOG00000021000 0.77 1 0.56 2.0e-62 5.43 5.64e-08 0.82 FALSE
Brain Sac3d1 gene expression ENSRNOG00000021003 0.12 3 0.05 1.1e-05 5.5 3.73e-08 0.84 FALSE
Brain Kcnk4 gene expression ENSRNOG00000021140 0.28 12 0.21 1.7e-19 5.73 1.03e-08 0.78 TRUE
Brain Otub1 gene expression ENSRNOG00000021175 0.62 36 0.46 4.9e-47 -5.38 7.48e-08 0.9 FALSE
Brain Snx32 gene expression ENSRNOG00000026527 0.17 1299 0.16 1.8e-14 -5.48 4.20e-08 0.72 FALSE
Brain Naaladl1 isoform ratio ENSRNOT00000054835 0.25 1 0.11 4.7e-10 -5.43 5.64e-08 0.82 FALSE
Brain Naaladl1 isoform ratio ENSRNOT00000095018 0.25 1 0.11 5.4e-10 5.43 5.64e-08 0.82 FALSE
Brain Slc22a12 isoform ratio ENSRNOT00000028665 0.06 1509 0.02 2.6e-03 -5.19 2.12e-07 0.74 TRUE
Brain Slc22a12 isoform ratio ENSRNOT00000092496 0.07 1 0.02 2.4e-03 5.54 2.97e-08 0.34 FALSE
Brain Macrod1 isoform ratio ENSRNOT00000091465 0.09 1 0.11 3.0e-10 5.58 2.45e-08 0 TRUE
Brain Otub1 isoform ratio ENSRNOT00000114563 0.11 5 0.08 3.2e-08 -5.4 6.68e-08 0.82 FALSE
Brain Snx32 isoform ratio ENSRNOT00000036745 0.12 1 0.1 3.8e-09 -5.39 6.87e-08 0.84 FALSE
Brain Snx32 isoform ratio ENSRNOT00000096559 0.14 1 0.11 2.2e-10 5.39 6.87e-08 0.84 FALSE
Brain Ehbp1l1 isoform ratio ENSRNOT00000077526 0.07 1413 0.05 2.2e-05 -5.11 3.20e-07 0.43 FALSE
Brain ENSRNOG00000062876 intron excision ratio chr1:203313183:203313863 0.06 1 0.04 2.6e-04 5.4 6.52e-08 0.12 FALSE
Brain Snx32 mRNA stability ENSRNOG00000026527 0.07 1 0.03 9.1e-04 -5.33 9.97e-08 0.12 FALSE
Eye Naaladl1 gene expression ENSRNOG00000021000 0.41 50 0.12 6.9e-03 5.45 4.92e-08 0.4 FALSE
IL Ovol1 gene expression ENSRNOG00000020669 0.25 1320 0.06 1.2e-02 -5.39 7.01e-08 0.46 FALSE
IL Naaladl1 gene expression ENSRNOG00000021000 0.69 11 0.21 7.9e-06 5.57 2.53e-08 0.75 FALSE
IL Rtn3 intron excision ratio chr1:204621909:204668857 0.38 1 0.14 2.8e-04 5.53 3.16e-08 0.22 FALSE
IL Pacs1 mRNA stability ENSRNOG00000020350 0.22 1 0.01 2.2e-01 -5.19 2.12e-07 0.07 FALSE
LHb Naaladl1 gene expression ENSRNOG00000021000 0.28 14 0.15 1.8e-04 5.34 9.15e-08 0.7 FALSE
LHb Snx15 gene expression ENSRNOG00000021007 0.55 1 0.14 3.9e-04 -5.3 1.13e-07 0.07 FALSE
LHb Kcnk4 gene expression ENSRNOG00000021140 0.18 1367 0.07 7.7e-03 5.19 2.08e-07 0.48 FALSE
Liver Macrod1 alternative polyA ENSRNOT00000091465 0.2 15 0.08 4.1e-09 5.22 1.81e-07 0.66 FALSE
Liver Otub1 alternative polyA ENSRNOT00000114563 0.16 97 0.09 1.9e-10 5.65 1.64e-08 0 FALSE
Liver Macrod1 alternative TSS ENSRNOT00000028749 0.05 1 0.03 4.9e-04 5.4 6.72e-08 0.09 FALSE
Liver Macrod1 alternative TSS ENSRNOT00000106741 0.04 1 0.03 6.5e-04 -5.4 6.72e-08 0.07 FALSE
Liver Znrd2 gene expression ENSRNOG00000012736 0.05 1 0.02 1.0e-03 5.31 1.09e-07 0.06 FALSE
Liver Naaladl1 gene expression ENSRNOG00000021000 0.07 1 0.06 9.2e-07 5.33 9.68e-08 0.67 FALSE
Liver Otub1 gene expression ENSRNOG00000021175 0.26 27 0.19 1.1e-20 -5.75 8.88e-09 0.88 FALSE
Liver Ehbp1l1 gene expression ENSRNOG00000056038 0.04 1 0.02 5.5e-03 -5.56 2.69e-08 0.07 FALSE
Liver Pcnx3 mRNA stability ENSRNOG00000020742 0.05 1 0.02 3.1e-03 -5.56 2.69e-08 0.38 FALSE
Liver Otub1 mRNA stability ENSRNOG00000021175 0.05 1 0.02 1.0e-03 5.55 2.90e-08 0.31 FALSE
NAcc Ovol1 gene expression ENSRNOG00000020669 0.08 1322 0.05 2.4e-04 -5.19 2.07e-07 0.56 FALSE
NAcc Naaladl1 gene expression ENSRNOG00000021000 0.61 134 0.46 1.1e-37 5.32 1.02e-07 0.76 FALSE
NAcc Sac3d1 gene expression ENSRNOG00000021003 0.36 1 0.23 7.7e-17 5.44 5.34e-08 0.83 FALSE
NAcc Otub1 gene expression ENSRNOG00000021175 0.28 11 0.26 1.3e-19 -5.6 2.18e-08 0.86 FALSE
NAcc Snx32 isoform ratio ENSRNOT00000096559 0.07 1298 0.04 6.6e-04 5.52 3.41e-08 0.72 FALSE
NAcc Ehbp1l1 isoform ratio ENSRNOT00000077526 0.05 1412 0.03 5.0e-03 -5.35 8.70e-08 0.46 FALSE
NAcc Efemp2 intron excision ratio chr1:202783177:202783817 0.05 1207 0.02 7.8e-03 5.23 1.73e-07 0.52 FALSE
NAcc Dnajc4 intron excision ratio chr1:204179906:204180400 0.06 1 0.04 8.7e-04 5.58 2.45e-08 0.25 FALSE
NAcc Otub1 mRNA stability ENSRNOG00000021175 0.04 1 0.03 1.8e-03 5.32 1.06e-07 0.06 FALSE
OFC Ovol1 gene expression ENSRNOG00000020669 0.25 1 0.16 1.0e-04 -5.39 6.91e-08 0.08 TRUE
OFC Naaladl1 gene expression ENSRNOG00000021000 0.63 22 0.26 7.8e-07 5.19 2.11e-07 0.66 FALSE
OFC Naaladl1 isoform ratio ENSRNOT00000054835 0.32 14 0.09 3.1e-03 -5.21 1.85e-07 0.45 FALSE
PL Yif1a gene expression ENSRNOG00000020201 0.07 1 0.03 2.8e-03 -5.34 9.11e-08 0.49 FALSE
PL Fosl1 gene expression ENSRNOG00000020552 0.06 1188 0.04 4.2e-04 -5.26 1.42e-07 0.76 FALSE
PL Efemp2 gene expression ENSRNOG00000020587 0.06 1207 0.04 2.4e-04 5.29 1.24e-07 0.74 FALSE
PL Ovol1 gene expression ENSRNOG00000020669 0.34 12 0.3 8.9e-23 -5.35 8.98e-08 0.69 FALSE
PL Capn1 gene expression ENSRNOG00000020935 0.26 1 0.1 3.6e-08 -5.56 2.64e-08 0.9 FALSE
PL Naaladl1 gene expression ENSRNOG00000021000 0.57 111 0.45 5.2e-38 5.19 2.15e-07 0.73 FALSE
PL Kcnk4 gene expression ENSRNOG00000021140 0.09 1367 0.05 7.1e-05 5.46 4.83e-08 0.84 FALSE
PL Snx32 gene expression ENSRNOG00000026527 0.07 1298 0.04 3.1e-04 -5.27 1.39e-07 0.7 FALSE
PL Snx32 isoform ratio ENSRNOT00000096559 0.1 1298 0.07 6.4e-06 5.13 2.84e-07 0.63 FALSE
PL Rtn3 intron excision ratio chr1:204621909:204655272 0.17 11 0.16 6.8e-12 -5.34 9.11e-08 0.56 FALSE