Best TWAS P=7.15e-09 · Best GWAS P=1.08e-08 conditioned to NaN
Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
---|---|---|---|---|---|---|---|---|---|---|---|
Adipose | Drap1 | gene expression | ENSRNOG00000020527 | 0.1 | 1 | 0.05 | 1.8e-06 | 5.31 | 1.09e-07 | 0.91 | FALSE |
Adipose | Fosl1 | gene expression | ENSRNOG00000020552 | 0.11 | 1189 | 0.03 | 2.0e-04 | -5.34 | 9.29e-08 | 0.87 | FALSE |
Adipose | Pcnx3 | gene expression | ENSRNOG00000020742 | 0.15 | 1 | 0.09 | 3.6e-10 | 5.31 | 1.09e-07 | 0.71 | FALSE |
Adipose | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.23 | 1 | 0.16 | 9.0e-18 | 5.37 | 8.04e-08 | 0.76 | FALSE |
Adipose | Fermt3 | gene expression | ENSRNOG00000021161 | 0.04 | 1 | 0.03 | 6.4e-04 | -5.42 | 5.84e-08 | 0.06 | FALSE |
Adipose | Cdca5 | gene expression | ENSRNOG00000046635 | 0.07 | 1 | 0.04 | 7.6e-05 | -5.42 | 5.84e-08 | 0.5 | FALSE |
Adipose | Ehbp1l1 | gene expression | ENSRNOG00000056038 | 0.32 | 1413 | 0.21 | 1.9e-23 | -5.62 | 1.90e-08 | 0.8 | FALSE |
Adipose | Ccdc85b | gene expression | ENSRNOG00000070266 | 0.03 | 1 | 0.01 | 1.1e-02 | -5.31 | 1.09e-07 | 0.06 | FALSE |
Adipose | Snx32 | isoform ratio | ENSRNOT00000096559 | 0.05 | 1299 | 0.03 | 3.0e-04 | 5.15 | 2.55e-07 | 0.65 | FALSE |
Adipose | Znrd2 | intron excision ratio | chr1:203018382:203018914 | 0.05 | 1413 | 0.01 | 1.4e-02 | 5.09 | 3.53e-07 | 0.48 | FALSE |
Adipose | Scyl1 | mRNA stability | ENSRNOG00000023668 | 0.15 | 1 | 0.1 | 2.8e-11 | -5.42 | 6.09e-08 | 0.8 | FALSE |
BLA | Ovol1 | gene expression | ENSRNOG00000020669 | 0.23 | 22 | 0.14 | 1.0e-07 | -5.79 | 7.15e-09 | 0.89 | TRUE |
BLA | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.7 | 1 | 0.51 | 4.3e-31 | 5.42 | 6.09e-08 | 0.81 | FALSE |
BLA | Rps6ka4 | gene expression | ENSRNOG00000021117 | 0.39 | 199 | 0.25 | 1.3e-13 | 5.59 | 2.33e-08 | 0.87 | FALSE |
BLA | Kcnk4 | gene expression | ENSRNOG00000021140 | 0.33 | 1370 | 0.21 | 1.1e-11 | 5.29 | 1.24e-07 | 0.86 | FALSE |
BLA | Ehbp1l1 | gene expression | ENSRNOG00000056038 | 0.09 | 1 | 0.05 | 1.3e-03 | 5.3 | 1.13e-07 | 0.13 | FALSE |
BLA | Naaladl1 | isoform ratio | ENSRNOT00000054835 | 0.09 | 1618 | 0.06 | 5.8e-04 | -5.24 | 1.59e-07 | 0.69 | FALSE |
BLA | Naaladl1 | isoform ratio | ENSRNOT00000095018 | 0.08 | 1618 | 0.06 | 6.8e-04 | 5.26 | 1.46e-07 | 0.68 | FALSE |
BLA | Otub1 | isoform ratio | ENSRNOT00000114563 | 0.24 | 3 | 0.17 | 2.9e-09 | -5.72 | 1.04e-08 | 0.86 | FALSE |
BLA | Spindoc | isoform ratio | ENSRNOT00000034477 | 0.07 | 1 | 0.04 | 5.2e-03 | 5.28 | 1.27e-07 | 0.1 | FALSE |
BLA | Spindoc | isoform ratio | ENSRNOT00000083157 | 0.08 | 1 | 0.05 | 1.8e-03 | -5.28 | 1.27e-07 | 0.12 | FALSE |
BLA | Ehbp1l1 | isoform ratio | ENSRNOT00000077526 | 0.06 | 1413 | 0.04 | 1.9e-03 | -5.58 | 2.39e-08 | 0.6 | FALSE |
BLA | Nrxn2 | intron excision ratio | chr1:203802213:203813559 | 0.08 | 1 | 0.03 | 9.7e-03 | -5.35 | 8.81e-08 | 0.06 | FALSE |
Brain | Fosl1 | gene expression | ENSRNOG00000020552 | 0.22 | 112 | 0.16 | 2.4e-14 | -5.11 | 3.31e-07 | 0.88 | FALSE |
Brain | Ovol1 | gene expression | ENSRNOG00000020669 | 0.23 | 1323 | 0.13 | 1.8e-12 | -5.23 | 1.71e-07 | 0.7 | FALSE |
Brain | Pcnx3 | gene expression | ENSRNOG00000020742 | 0.11 | 1 | 0.09 | 8.6e-09 | 5.26 | 1.47e-07 | 0.64 | FALSE |
Brain | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.77 | 1 | 0.56 | 2.0e-62 | 5.43 | 5.64e-08 | 0.82 | FALSE |
Brain | Sac3d1 | gene expression | ENSRNOG00000021003 | 0.12 | 3 | 0.05 | 1.1e-05 | 5.5 | 3.73e-08 | 0.84 | FALSE |
Brain | Kcnk4 | gene expression | ENSRNOG00000021140 | 0.28 | 12 | 0.21 | 1.7e-19 | 5.73 | 1.03e-08 | 0.78 | TRUE |
Brain | Otub1 | gene expression | ENSRNOG00000021175 | 0.62 | 36 | 0.46 | 4.9e-47 | -5.38 | 7.48e-08 | 0.9 | FALSE |
Brain | Snx32 | gene expression | ENSRNOG00000026527 | 0.17 | 1299 | 0.16 | 1.8e-14 | -5.48 | 4.20e-08 | 0.72 | FALSE |
Brain | Naaladl1 | isoform ratio | ENSRNOT00000054835 | 0.25 | 1 | 0.11 | 4.7e-10 | -5.43 | 5.64e-08 | 0.82 | FALSE |
Brain | Naaladl1 | isoform ratio | ENSRNOT00000095018 | 0.25 | 1 | 0.11 | 5.4e-10 | 5.43 | 5.64e-08 | 0.82 | FALSE |
Brain | Slc22a12 | isoform ratio | ENSRNOT00000028665 | 0.06 | 1509 | 0.02 | 2.6e-03 | -5.19 | 2.12e-07 | 0.74 | TRUE |
Brain | Slc22a12 | isoform ratio | ENSRNOT00000092496 | 0.07 | 1 | 0.02 | 2.4e-03 | 5.54 | 2.97e-08 | 0.34 | FALSE |
Brain | Macrod1 | isoform ratio | ENSRNOT00000091465 | 0.09 | 1 | 0.11 | 3.0e-10 | 5.58 | 2.45e-08 | 0 | TRUE |
Brain | Otub1 | isoform ratio | ENSRNOT00000114563 | 0.11 | 5 | 0.08 | 3.2e-08 | -5.4 | 6.68e-08 | 0.82 | FALSE |
Brain | Snx32 | isoform ratio | ENSRNOT00000036745 | 0.12 | 1 | 0.1 | 3.8e-09 | -5.39 | 6.87e-08 | 0.84 | FALSE |
Brain | Snx32 | isoform ratio | ENSRNOT00000096559 | 0.14 | 1 | 0.11 | 2.2e-10 | 5.39 | 6.87e-08 | 0.84 | FALSE |
Brain | Ehbp1l1 | isoform ratio | ENSRNOT00000077526 | 0.07 | 1413 | 0.05 | 2.2e-05 | -5.11 | 3.20e-07 | 0.43 | FALSE |
Brain | ENSRNOG00000062876 | intron excision ratio | chr1:203313183:203313863 | 0.06 | 1 | 0.04 | 2.6e-04 | 5.4 | 6.52e-08 | 0.12 | FALSE |
Brain | Snx32 | mRNA stability | ENSRNOG00000026527 | 0.07 | 1 | 0.03 | 9.1e-04 | -5.33 | 9.97e-08 | 0.12 | FALSE |
Eye | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.41 | 50 | 0.12 | 6.9e-03 | 5.45 | 4.92e-08 | 0.4 | FALSE |
IL | Ovol1 | gene expression | ENSRNOG00000020669 | 0.25 | 1320 | 0.06 | 1.2e-02 | -5.39 | 7.01e-08 | 0.46 | FALSE |
IL | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.69 | 11 | 0.21 | 7.9e-06 | 5.57 | 2.53e-08 | 0.75 | FALSE |
IL | Rtn3 | intron excision ratio | chr1:204621909:204668857 | 0.38 | 1 | 0.14 | 2.8e-04 | 5.53 | 3.16e-08 | 0.22 | FALSE |
IL | Pacs1 | mRNA stability | ENSRNOG00000020350 | 0.22 | 1 | 0.01 | 2.2e-01 | -5.19 | 2.12e-07 | 0.07 | FALSE |
LHb | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.28 | 14 | 0.15 | 1.8e-04 | 5.34 | 9.15e-08 | 0.7 | FALSE |
LHb | Snx15 | gene expression | ENSRNOG00000021007 | 0.55 | 1 | 0.14 | 3.9e-04 | -5.3 | 1.13e-07 | 0.07 | FALSE |
LHb | Kcnk4 | gene expression | ENSRNOG00000021140 | 0.18 | 1367 | 0.07 | 7.7e-03 | 5.19 | 2.08e-07 | 0.48 | FALSE |
Liver | Macrod1 | alternative polyA | ENSRNOT00000091465 | 0.2 | 15 | 0.08 | 4.1e-09 | 5.22 | 1.81e-07 | 0.66 | FALSE |
Liver | Otub1 | alternative polyA | ENSRNOT00000114563 | 0.16 | 97 | 0.09 | 1.9e-10 | 5.65 | 1.64e-08 | 0 | FALSE |
Liver | Macrod1 | alternative TSS | ENSRNOT00000028749 | 0.05 | 1 | 0.03 | 4.9e-04 | 5.4 | 6.72e-08 | 0.09 | FALSE |
Liver | Macrod1 | alternative TSS | ENSRNOT00000106741 | 0.04 | 1 | 0.03 | 6.5e-04 | -5.4 | 6.72e-08 | 0.07 | FALSE |
Liver | Znrd2 | gene expression | ENSRNOG00000012736 | 0.05 | 1 | 0.02 | 1.0e-03 | 5.31 | 1.09e-07 | 0.06 | FALSE |
Liver | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.07 | 1 | 0.06 | 9.2e-07 | 5.33 | 9.68e-08 | 0.67 | FALSE |
Liver | Otub1 | gene expression | ENSRNOG00000021175 | 0.26 | 27 | 0.19 | 1.1e-20 | -5.75 | 8.88e-09 | 0.88 | FALSE |
Liver | Ehbp1l1 | gene expression | ENSRNOG00000056038 | 0.04 | 1 | 0.02 | 5.5e-03 | -5.56 | 2.69e-08 | 0.07 | FALSE |
Liver | Pcnx3 | mRNA stability | ENSRNOG00000020742 | 0.05 | 1 | 0.02 | 3.1e-03 | -5.56 | 2.69e-08 | 0.38 | FALSE |
Liver | Otub1 | mRNA stability | ENSRNOG00000021175 | 0.05 | 1 | 0.02 | 1.0e-03 | 5.55 | 2.90e-08 | 0.31 | FALSE |
NAcc | Ovol1 | gene expression | ENSRNOG00000020669 | 0.08 | 1322 | 0.05 | 2.4e-04 | -5.19 | 2.07e-07 | 0.56 | FALSE |
NAcc | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.61 | 134 | 0.46 | 1.1e-37 | 5.32 | 1.02e-07 | 0.76 | FALSE |
NAcc | Sac3d1 | gene expression | ENSRNOG00000021003 | 0.36 | 1 | 0.23 | 7.7e-17 | 5.44 | 5.34e-08 | 0.83 | FALSE |
NAcc | Otub1 | gene expression | ENSRNOG00000021175 | 0.28 | 11 | 0.26 | 1.3e-19 | -5.6 | 2.18e-08 | 0.86 | FALSE |
NAcc | Snx32 | isoform ratio | ENSRNOT00000096559 | 0.07 | 1298 | 0.04 | 6.6e-04 | 5.52 | 3.41e-08 | 0.72 | FALSE |
NAcc | Ehbp1l1 | isoform ratio | ENSRNOT00000077526 | 0.05 | 1412 | 0.03 | 5.0e-03 | -5.35 | 8.70e-08 | 0.46 | FALSE |
NAcc | Efemp2 | intron excision ratio | chr1:202783177:202783817 | 0.05 | 1207 | 0.02 | 7.8e-03 | 5.23 | 1.73e-07 | 0.52 | FALSE |
NAcc | Dnajc4 | intron excision ratio | chr1:204179906:204180400 | 0.06 | 1 | 0.04 | 8.7e-04 | 5.58 | 2.45e-08 | 0.25 | FALSE |
NAcc | Otub1 | mRNA stability | ENSRNOG00000021175 | 0.04 | 1 | 0.03 | 1.8e-03 | 5.32 | 1.06e-07 | 0.06 | FALSE |
OFC | Ovol1 | gene expression | ENSRNOG00000020669 | 0.25 | 1 | 0.16 | 1.0e-04 | -5.39 | 6.91e-08 | 0.08 | TRUE |
OFC | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.63 | 22 | 0.26 | 7.8e-07 | 5.19 | 2.11e-07 | 0.66 | FALSE |
OFC | Naaladl1 | isoform ratio | ENSRNOT00000054835 | 0.32 | 14 | 0.09 | 3.1e-03 | -5.21 | 1.85e-07 | 0.45 | FALSE |
PL | Yif1a | gene expression | ENSRNOG00000020201 | 0.07 | 1 | 0.03 | 2.8e-03 | -5.34 | 9.11e-08 | 0.49 | FALSE |
PL | Fosl1 | gene expression | ENSRNOG00000020552 | 0.06 | 1188 | 0.04 | 4.2e-04 | -5.26 | 1.42e-07 | 0.76 | FALSE |
PL | Efemp2 | gene expression | ENSRNOG00000020587 | 0.06 | 1207 | 0.04 | 2.4e-04 | 5.29 | 1.24e-07 | 0.74 | FALSE |
PL | Ovol1 | gene expression | ENSRNOG00000020669 | 0.34 | 12 | 0.3 | 8.9e-23 | -5.35 | 8.98e-08 | 0.69 | FALSE |
PL | Capn1 | gene expression | ENSRNOG00000020935 | 0.26 | 1 | 0.1 | 3.6e-08 | -5.56 | 2.64e-08 | 0.9 | FALSE |
PL | Naaladl1 | gene expression | ENSRNOG00000021000 | 0.57 | 111 | 0.45 | 5.2e-38 | 5.19 | 2.15e-07 | 0.73 | FALSE |
PL | Kcnk4 | gene expression | ENSRNOG00000021140 | 0.09 | 1367 | 0.05 | 7.1e-05 | 5.46 | 4.83e-08 | 0.84 | FALSE |
PL | Snx32 | gene expression | ENSRNOG00000026527 | 0.07 | 1298 | 0.04 | 3.1e-04 | -5.27 | 1.39e-07 | 0.7 | FALSE |
PL | Snx32 | isoform ratio | ENSRNOT00000096559 | 0.1 | 1298 | 0.07 | 6.4e-06 | 5.13 | 2.84e-07 | 0.63 | FALSE |
PL | Rtn3 | intron excision ratio | chr1:204621909:204655272 | 0.17 | 11 | 0.16 | 6.8e-12 | -5.34 | 9.11e-08 | 0.56 | FALSE |