Best TWAS P=1.488496e-07 · Best GWAS P=0.2032097 conditioned to 0.4986005
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Liver | Foxred1 | isoform ratio | ENSRNOT00000091308 | 0.38 | 0 | blup | 742 | 0.03 | 0.00015 | 0.93 | -5.3 | 1.5e-07 | 0.11 | 0 | 0 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.