Best TWAS P=2.82e-08 · Best GWAS P=3.21e-08 conditioned to 1.36e-01
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Adipose | RGD1359108 | gene expression | RGD1359108 | 0.19 | 1 | 0.09 | 8.8e-10 | 5.32 | 1.04e-07 | 0.74 | FALSE |
| Adipose | RGD1359108 | isoform ratio | XM_039109830.1 | 0.09 | 1 | 0.04 | 2.8e-05 | 5.21 | 1.90e-07 | 0.34 | FALSE |
| BLA | LOC102557269 | gene expression | LOC102557269 | 0.26 | 1 | 0.13 | 1.6e-07 | 5.4 | 6.78e-08 | 0.79 | FALSE |
| BLA | LOC102557269 | mRNA stability | LOC102557269 | 0.43 | 1 | 0.27 | 7.1e-15 | 5.4 | 6.56e-08 | 0.81 | FALSE |
| NAcc | RGD1359108 | alternative TSS | XM_039109829.1 | 0.05 | 1 | 0.04 | 1.9e-05 | 5.39 | 7.21e-08 | 0.38 | FALSE |
| NAcc | RGD1359108 | alternative TSS | NM_001007702.2 | 0.05 | 1 | 0.04 | 5.1e-05 | -5.39 | 7.21e-08 | 0.35 | FALSE |
| NAcc | RGD1359108 | alternative TSS | XM_039109829.1 | 0.05 | 1 | 0.04 | 3.3e-05 | 5.4 | 6.78e-08 | 0.42 | FALSE |
| NAcc | LOC102557269 | gene expression | LOC102557269 | 0.21 | 1 | 0.25 | 9.4e-29 | 5.4 | 6.78e-08 | 0.81 | FALSE |
| NAcc | LOC102557269 | mRNA stability | LOC102557269 | 0.25 | 12 | 0.11 | 1.9e-12 | -5.45 | 5.08e-08 | 0.81 | FALSE |
| PL | RGD1359108 | alternative TSS | XM_039109829.1 | 0.03 | 1 | 0.01 | 2.8e-02 | 5.2 | 2.04e-07 | 0.04 | FALSE |
| PL | RGD1359108 | gene expression | RGD1359108 | 0.28 | 1022 | 0.05 | 2.9e-06 | 5.55 | 2.82e-08 | 0.79 | TRUE |
| pVTA | LOC102557269 | gene expression | LOC102557269 | 0.23 | 1 | 0.12 | 5.7e-06 | 5.29 | 1.24e-07 | 0.58 | FALSE |