Hub : Traits : Bone: periosteal estimation : ← : →

chr10:89,949,449-97,254,740

Trait: Bone: periosteal estimation

Best TWAS P = 3.35e-08 · Best GWAS P= 4.75e-08 conditioned to 1.00e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Ccdc47	alternative TSS	XM_039086169.2	0.07	2131	0.04	8.5e-05	-5.21	1.92e-07	0.68	FALSE
Adipose	Kcnj2	gene expression	Kcnj2	0.08	3209	0.05	2.5e-06	5.26	1.48e-07	0.37	TRUE
BLA	Helz	alternative polyA	XM_063268757.1	0.07	2077	0.04	3.5e-03	-5.37	7.78e-08	0.43	FALSE
BLA	Helz	alternative polyA	XM_063268757.1	0.07	2077	0.04	4.3e-03	-5.25	1.53e-07	0.43	FALSE
BLA	Abca5	gene expression	Abca5	0.07	2940	0.02	2.4e-02	5.35	8.83e-08	0.26	TRUE
Brain	Ace	gene expression	Ace	0.1	1	0.1	7.2e-10	5.32	1.03e-07	0.83	FALSE
Brain	Kcnh6	gene expression	Kcnh6	0.05	1	0.03	1.3e-03	5.32	1.03e-07	0.26	FALSE
Brain	LOC108352151	gene expression	LOC108352151	0.04	2348	0.06	4.6e-06	-5.23	1.72e-07	0.48	FALSE
Brain	Bptf	mRNA stability	Bptf	0.12	1896	0.12	4.8e-11	5.32	1.03e-07	0.63	TRUE
IC	LOC120095203	gene expression	LOC120095203	0.23	24	0.18	4.8e-08	5.52	3.35e-08	0.6	TRUE
IL	Cyb561	alternative TSS	NM_001107056.3	0.3	22	0.02	9.9e-02	-5.41	6.40e-08	0.41	FALSE
IL	Cyb561	isoform ratio	NM_001107056.3	0.64	2180	0.24	1.7e-06	5.36	8.48e-08	0.52	FALSE
IL	Strada	mRNA stability	Strada	0.34	1	0.32	1.4e-08	-5.26	1.43e-07	0.56	TRUE
LHb	Scn4a	gene expression	Scn4a	0.66	1	0.31	4.9e-08	-5.3	1.15e-07	0.8	FALSE
LHb	Taco1	mRNA stability	Taco1	0.18	1	0.09	3.8e-03	5.24	1.65e-07	0.09	FALSE
Liver	Gna13	gene expression	Gna13	0.04	2784	0.01	3.4e-02	-5.35	8.71e-08	0.31	FALSE
Liver	Taco1	mRNA stability	Taco1	0.09	13	0.11	5.1e-12	-5.25	1.50e-07	0.71	FALSE
NAcc	Cacng4	gene expression	Cacng4	0.16	40	0.22	4.5e-33	5.3	1.16e-07	0.67	FALSE
NAcc	Ccdc47	gene expression	Ccdc47	0.05	29	0.05	2.8e-08	-5.46	4.80e-08	0.73	TRUE
NAcc	LOC108352150	isoform ratio	XR_001840306.3	0.03	2327	0.04	2.6e-06	-5.21	1.86e-07	0.55	FALSE
NAcc	Cacng4	mRNA stability	Cacng4	0.08	24	0.09	1.6e-13	-5.36	8.29e-08	0.65	FALSE
PL	Tlk2	isoform ratio	XM_006247574.5	0.06	1	0.05	2.7e-06	-5.25	1.56e-07	0.91	TRUE
PL	Cacng4	mRNA stability	Cacng4	0.03	1	0.03	3.8e-04	5.31	1.13e-07	0.14	FALSE
pVTA	Prkca	mRNA stability	Prkca	0.06	1	0.04	4.2e-04	5.31	1.13e-07	0.12	TRUE
RMTg	Scn4a	gene expression	Scn4a	0.3	17	0.33	1.5e-09	5.21	1.88e-07	0.58	TRUE