Hub : Traits : Rb content in liver : →

chr8:29,620,582-31,650,241

Trait: Rb content in liver

Best TWAS P=2.85e-08 · Best GWAS P=1.39e-08 conditioned to 1e+00

Associated models

Tissue	Gene	RNA modality	RNA phenotype	h2	# weights	Model R2	Model R2 P	TWAS Z	TWAS P	Coloc P	Joint
Adipose	Arhgap32	alternative TSS	XM_006242778.4	0.09	3	0.09	1.5e-10	5.25	1.55e-07	0.44	FALSE
Adipose	Arhgap32	gene expression	Arhgap32	0.06	1631	0.05	4.3e-06	-5.22	1.76e-07	0.58	FALSE
BLA	Barx2	gene expression	Barx2	0.21	76	0.16	5.1e-09	-5.28	1.27e-07	0.39	FALSE
BLA	Kcnj1	gene expression	Kcnj1	0.05	1	0.01	5.0e-02	5.22	1.82e-07	0.04	FALSE
Brain	Arhgap32	alternative TSS	XM_006242778.4	0.06	1	0.05	4.2e-05	5.2	2.04e-07	0.08	FALSE
Brain	Arhgap32	gene expression	Arhgap32	0.28	28	0.3	1.1e-28	5.35	8.67e-08	0.41	FALSE
Brain	Kcnj5	gene expression	Kcnj5	0.04	1	0.04	1.2e-04	5.47	4.49e-08	0.15	FALSE
Brain	Arhgap32	isoform ratio	XM_008766070.3	0.05	1	0.03	4.9e-04	-5.21	1.87e-07	0.06	FALSE
Brain	Kcnj5	isoform ratio	NM_017297.2	0.19	27	0.22	3.1e-20	-5.42	5.89e-08	0.72	FALSE
Brain	Kcnj5	isoform ratio	XR_005487750.1	0.17	1	0.21	6.9e-19	-5.38	7.53e-08	0.57	FALSE
Brain	Arhgap32	intron excision ratio	chr8_30624734_30658098	0.05	1650	0.03	7.0e-04	-5.19	2.08e-07	0.44	FALSE
Brain	Arhgap32	mRNA stability	Arhgap32	0.03	1	0.01	3.7e-02	5.19	2.09e-07	0.03	FALSE
IL	Arhgap32	gene expression	Arhgap32	0.16	1	0.03	6.0e-02	-5.3	1.15e-07	0.05	FALSE
LHb	Barx2	gene expression	Barx2	0.11	2	0.11	1.7e-03	5.18	2.24e-07	0.36	FALSE
LHb	Kcnj5	isoform ratio	NM_017297.2	0.39	1	0.45	6.0e-12	5.38	7.53e-08	0.55	FALSE
LHb	Kcnj5	isoform ratio	XR_005487750.1	0.35	274	0.38	4.4e-10	-5.3	1.18e-07	0.59	FALSE
Liver	Arhgap32	alternative TSS	XM_006242777.4	0.02	1	0.01	3.1e-02	-5.38	7.53e-08	0.03	FALSE
Liver	Fli1	gene expression	Fli1	0.03	1	0.02	1.2e-03	-5.2	2.04e-07	0.04	FALSE
NAcc	Arhgap32	alternative TSS	XM_006242778.4	0.04	1	0.04	2.1e-05	5.2	2.04e-07	0.23	FALSE
NAcc	Arhgap32	gene expression	Arhgap32	0.03	4	0.04	5.9e-06	5.27	1.36e-07	0.46	FALSE
NAcc	Kcnj1	gene expression	Kcnj1	0.03	1	0.04	6.1e-06	5.47	4.49e-08	0.45	FALSE
NAcc	Arhgap32	isoform ratio	XM_008766070.3	0.02	1	0.02	7.8e-04	-5.21	1.87e-07	0.04	FALSE
NAcc	Kcnj5	isoform ratio	NM_017297.2	0.17	31	0.28	4.9e-32	-5.22	1.75e-07	0.44	FALSE
NAcc	Kcnj5	isoform ratio	XR_005487750.1	0.14	14	0.18	7.6e-21	5.26	1.41e-07	0.47	FALSE
NAcc	Arhgap32	intron excision ratio	chr8_30674889_30676047	0.04	19	0.05	1.7e-06	-5.55	2.85e-08	0.49	TRUE
NAcc	Arhgap32	intron excision ratio	chr8_30674889_30676050	0.04	1	0.05	1.8e-06	5.47	4.41e-08	0.59	FALSE
NAcc	Kcnj5	intron excision ratio	chr8_30732405_30752814	0.02	1	0.02	2.7e-03	5.2	2.04e-07	0.03	FALSE
NAcc	Kcnj5	mRNA stability	Kcnj5	0.03	1	0.04	2.4e-05	5.5	3.71e-08	0.57	FALSE
PL	Arhgap32	alternative TSS	XM_039082294.1	0.04	1	0.02	4.1e-03	-5.22	1.83e-07	0.04	FALSE
PL	Arhgap32	gene expression	Arhgap32	0.12	35	0.13	4.1e-14	5.43	5.67e-08	0.54	FALSE
PL	Barx2	gene expression	Barx2	0.07	1	0.04	8.7e-05	5.21	1.87e-07	0.1	FALSE
PL	Kcnj5	isoform ratio	NM_017297.2	0.12	66	0.26	1.7e-28	5.41	6.34e-08	0.42	FALSE
PL	Kcnj5	isoform ratio	XR_005487750.1	0.18	22	0.27	1.4e-29	5.47	4.46e-08	0.46	FALSE
pVTA	Barx2	gene expression	Barx2	0.14	27	0.11	1.4e-05	-5.45	5.16e-08	0.34	FALSE
pVTA	Kcnj5	isoform ratio	NM_017297.2	0.26	30	0.33	6.2e-15	5.45	5.14e-08	0.67	FALSE
pVTA	Kcnj5	isoform ratio	XR_005487750.1	0.25	1	0.29	8.1e-13	-5.38	7.53e-08	0.57	FALSE
RMTg	Kcnj5	gene expression	Kcnj5	0.18	22	0.06	8.6e-03	-5.4	6.75e-08	0.31	FALSE
RMTg	Kcnj5	isoform ratio	NM_017297.2	0.16	1538	0.08	3.1e-03	-5.51	3.62e-08	0.6	FALSE
RMTg	Kcnj5	isoform ratio	XR_005487750.1	0.17	1	0.16	3.8e-05	-5.22	1.83e-07	0.06	FALSE