Best TWAS P=1.481589e-53 · Best GWAS P=NaN conditioned to NA
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | PL | NA | isoform ratio | ENSRNOT00000101301 | 0.47 | 0.01 | blup | 201 | 0.01 | 0.026 | 0.96 | -7.8 | 5.3e-15 | NA | 0 | 0.01 | FALSE |
| 2 | PL | NA | isoform ratio | ENSRNOT00000101388 | 0.57 | 0.01 | blup | 201 | 0.02 | 0.015 | 0.96 | 15.4 | 1.5e-53 | NA | 0 | 0.01 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.