Best TWAS P=1.013014e-08 · Best GWAS P=0.2114749 conditioned to 1.443798e-39
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Adipose | Ptprb | isoform ratio | ENSRNOT00000085334 | 0.09 | 0.09 | enet | 39 | 0.13 | 5.7e-14 | 0.97 | 5.7 | 1e-08 | -0.88 | 0.05 | 0.03 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.