chr20:4,913,192-6,657,065

Trait: Epididymis fat weight

Best TWAS P=7.68e-10 · Best GWAS P=1.86e-09 conditioned to 1.00e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
Adipose ENSRNOG00000058912 alternative polyA ENSRNOT00000090993 0.06 11 0.03 5.0e-04 -5.53 3.25e-08 0.85 FALSE
Adipose ENSRNOG00000058912 alternative polyA ENSRNOT00000115941 0.08 13 0.04 6.6e-05 5.53 3.26e-08 0.9 FALSE
Adipose Spdef gene expression ENSRNOG00000000491 0.11 1 0.05 7.4e-06 5.93 3.10e-09 0.73 TRUE
Adipose Snrpc gene expression ENSRNOG00000000493 0.7 230 0.26 3.5e-28 -5.32 1.06e-07 0.83 FALSE
Adipose Ilrun gene expression ENSRNOG00000038883 0.72 101 0.52 9.1e-68 5.97 2.42e-09 0.85 FALSE
Adipose ENSRNOG00000058912 gene expression ENSRNOG00000058912 0.72 61 0.49 1.9e-61 5.96 2.54e-09 0.91 FALSE
BLA Nudt3 gene expression ENSRNOG00000061176 0.25 1 0.11 2.0e-06 -5.53 3.19e-08 0.39 FALSE
Eye Ilrun gene expression ENSRNOG00000038883 0.91 2269 0.29 2.2e-05 5.41 6.37e-08 0.68 FALSE
IL ENSRNOG00000058912 gene expression ENSRNOG00000058912 0.33 1 0.12 9.2e-04 5.54 3.06e-08 0.06 FALSE
IL Nudt3 gene expression ENSRNOG00000061176 0.31 112 0.12 7.5e-04 -6.07 1.30e-09 0.19 FALSE
IL Taf11 mRNA stability ENSRNOG00000024601 0.49 2286 0.26 6.6e-07 5.86 4.56e-09 0.16 FALSE
LHb Ilrun gene expression ENSRNOG00000038883 0.75 2267 0.16 1.2e-04 5.37 8.08e-08 0.88 FALSE
Liver Hmga1 gene expression ENSRNOG00000000488 0.09 2507 0.01 6.9e-02 -5.7 1.21e-08 0.65 FALSE
Liver Snrpc gene expression ENSRNOG00000000493 0.9 147 0.48 1.8e-59 -6.15 7.68e-10 0.85 TRUE
Liver Taf11 gene expression ENSRNOG00000024601 0.09 58 0.03 5.0e-04 -6.11 9.76e-10 0.23 TRUE
Liver Ilrun gene expression ENSRNOG00000038883 0.87 68 0.41 7.0e-49 5.29 1.25e-07 0.85 FALSE
Liver Nudt3 gene expression ENSRNOG00000061176 0.11 44 0.03 1.8e-04 -5.59 2.28e-08 0.53 TRUE
Liver Snrpc intron excision ratio chr20:5896204:5896392 0.54 164 0.39 2.2e-45 -5.42 6.06e-08 0.44 FALSE
NAcc Ilrun gene expression ENSRNOG00000038883 0.82 2268 0.62 4.6e-58 5.46 4.68e-08 0.92 FALSE
NAcc ENSRNOG00000058912 gene expression ENSRNOG00000058912 0.21 1 0.11 2.2e-08 5.92 3.23e-09 0.91 TRUE
OFC Uhrf1bp1 isoform ratio ENSRNOT00000102198 0.2 2284 0.04 4.3e-02 5.35 8.81e-08 0.43 FALSE
OFC Ilrun intron excision ratio chr20:5812549:5825543 0.52 1 0.17 7.9e-05 -5.54 3.06e-08 0.07 FALSE
PL Pacsin1 gene expression ENSRNOG00000054603 0.13 34 0.12 1.3e-09 5.11 3.25e-07 0.09 FALSE
PL ENSRNOG00000058912 gene expression ENSRNOG00000058912 0.37 2282 0.17 1.2e-12 5.47 4.43e-08 0.92 FALSE
PL Nudt3 gene expression ENSRNOG00000061176 0.22 1 0.1 2.6e-08 -5.52 3.42e-08 0.52 TRUE
PL Ilrun intron excision ratio chr20:5812549:5825543 0.09 2268 0.04 5.1e-04 -5.92 3.21e-09 0.39 FALSE