chr1:140,610,199-142,727,457

Trait: Patch foraging water rate 18 sec

Best TWAS P=1.37e-10 · Best GWAS P=3.55e-09 conditioned to 1e+00

Associated models

Tissue Gene RNA modality RNA phenotype h2 # weights Model R2 Model R2 P TWAS Z TWAS P Coloc P Joint
BLA Ctsc gene expression Ctsc 0.1 1 0.08 7.2e-05 -5.88 4.12e-09 0.42 FALSE
BLA Ctsc isoform ratio XM_008759637.3 0.05 1 0.03 1.2e-02 -5.77 7.85e-09 0.05 FALSE
BLA Grm5 isoform ratio XM_017588780.2 0.06 2702 0.01 6.6e-02 -6.18 6.29e-10 0.49 FALSE
Brain Ctsc alternative polyA NM_017097.2 0.06 1 0.07 5.1e-07 5.77 7.85e-09 0.78 FALSE
Brain Ctsc alternative polyA XM_008759637.3 0.06 1 0.07 2.3e-07 -5.74 9.66e-09 0.75 FALSE
Brain Grm5 gene expression Grm5 0.55 26 0.32 1.9e-30 6.42 1.37e-10 0.7 TRUE
Brain Ctsc isoform ratio NM_017097.2 0.06 1 0.06 4.1e-06 5.58 2.34e-08 0.51 FALSE
Brain Ctsc isoform ratio XM_008759637.3 0.06 1 0.06 1.2e-06 -5.58 2.34e-08 0.54 FALSE
Brain Grm5 mRNA stability Grm5 0.11 1 0.09 4.7e-09 5.73 1.00e-08 0.83 FALSE
Eye Ctsc gene expression Ctsc 0.37 2521 0.14 3.3e-03 5.89 3.96e-09 0.33 FALSE
Liver LOC102554680 gene expression LOC102554680 0.04 2516 0.03 5.3e-04 5.44 5.37e-08 0.63 TRUE
NAcc Grm5 gene expression Grm5 0.05 1 0.05 1.4e-06 5.44 5.42e-08 0.43 FALSE
NAcc Ctsc isoform ratio NM_017097.2 0.03 1 0.04 2.3e-05 5.65 1.61e-08 0.22 FALSE
NAcc Ctsc isoform ratio XM_008759637.3 0.03 1 0.04 5.3e-05 -5.65 1.61e-08 0.15 FALSE
NAcc Grm5 isoform ratio XM_017588779.2 0.05 2702 0.05 4.8e-06 6.1 1.09e-09 0.58 FALSE
PL Grm5 gene expression Grm5 0.03 23 0.03 1.2e-04 -5.26 1.40e-07 0.24 TRUE
PL Grm5 isoform ratio XM_006229659.4 0.02 2702 0.01 5.9e-02 5.26 1.40e-07 0.21 FALSE
RMTg Grm5 mRNA stability Grm5 0.21 2702 0.11 6.1e-04 -5.86 4.70e-09 0.11 FALSE