Best TWAS P = 1.49e-08 · Best GWAS P= 4.60e-07 conditioned to 1.00e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Liver | LOC102553539 | gene expression | LOC102553539 | 0.13 | 2529 | 0.08 | 3.9e-09 | -5.66 | 1.49e-08 | 0.66 | TRUE |
| Liver | Ntn4 | gene expression | Ntn4 | 0.1 | 2576 | 0.07 | 2.9e-08 | -5.23 | 1.69e-07 | 0.54 | FALSE |
| Liver | LOC102553539 | intron excision ratio | chr7_29886183_29886888 | 0.18 | 2529 | 0.12 | 9.1e-13 | -5.58 | 2.41e-08 | 0.64 | FALSE |
| PL | Lta4h | mRNA stability | Lta4h | 0.05 | 2416 | 0.05 | 1.4e-06 | 5.24 | 1.61e-07 | 0.66 | FALSE |