Best TWAS P=2.783448e-07 · Best GWAS P=0.0866114 conditioned to 0.5759163
# | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | Adipose | Rab2b | alternative polyA | ENSRNOT00000106538 | 0.07 | 0.04 | enet | 128 | 0.04 | 8.7e-06 | 0.53 | 5.1 | 2.8e-07 | -0.43 | 0.06 | 0.03 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.