Best TWAS P=1.914126e-07 · Best GWAS P=0.0007939655 conditioned to 1
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | PL | Epha6 | alternative TSS | ENSRNOT00000047310 | 0.03 | 0.03 | enet | 548 | 0.03 | 0.0034 | -2.6 | -5.2 | 1.9e-07 | 0.99 | 0.38 | 0.24 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.