Hub : Traits : tautz: manual_spc10 : ←

chr5:137,682,119-139,250,049

Best TWAS P=3.095094e-24 · Best GWAS P=0.0008112136 conditioned to 0.02738253

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Stk40	intron excision ratio	chr5:138406745:138409651	0.20	0.03	blup	1102	0.06	2.2e-07	2.0	-5.7	1.5e-08	-0.40	0.31	0.17	FALSE
2	Adipose	Stk40	intron excision ratio	chr5:138406745:138412128	0.20	0.03	blup	1102	0.06	5.9e-07	2.0	5.4	6.1e-08	0.33	0.26	0.16	TRUE
3	Liver	Map7d1	gene expression	ENSRNOG00000010237	0.44	0.18	blup	855	0.29	1.3e-32	1.8	5.8	6.8e-09	0.93	0.40	0.17	FALSE
4	Liver	Stk40	mRNA stability	ENSRNOG00000025679	0.26	0.04	blup	1102	0.13	2.0e-14	2.2	10.2	3.1e-24	0.51	0.39	0.29	TRUE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.