Best TWAS P = 9.44e-08 · Best GWAS P= 1.83e-08 conditioned to 1e+00
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| PL | LOC134480721 | gene expression | LOC134480721 | 0.03 | 37 | 0.03 | 6.9e-04 | 5.34 | 9.44e-08 | 0.3 | TRUE |
| pVTA | Kcnj16 | alternative polyA | NM_053314.3 | 0.04 | 2850 | 0.05 | 1.1e-04 | 5.33 | 1.00e-07 | 0.52 | FALSE |
| pVTA | Kcnj16 | alternative polyA | XM_006247570.4 | 0.04 | 2850 | 0.05 | 7.0e-05 | -5.31 | 1.12e-07 | 0.53 | FALSE |
| pVTA | Kcnj16 | gene expression | Kcnj16 | 0.27 | 55 | 0.44 | 1.3e-38 | 5.23 | 1.66e-07 | 0.58 | FALSE |
| pVTA | Kcnj16 | isoform ratio | NM_053314.3 | 0.16 | 30 | 0.22 | 6.7e-18 | 5.3 | 1.19e-07 | 0.54 | FALSE |
| pVTA | Kcnj16 | isoform ratio | XM_006247570.4 | 0.16 | 26 | 0.22 | 5.6e-18 | -5.28 | 1.30e-07 | 0.55 | FALSE |