Best TWAS P=1.684201e-07 · Best GWAS P=3.88054e-06 conditioned to 0.4520549
| # | Tissue | Gene | Modality | RNA phenotype | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | OFC | Schip1 | isoform ratio | ENSRNOT00000115543 | 0.33 | 0 | blup | 2512 | 0.03 | 0.073 | 4.5 | -5.2 | 1.7e-07 | -0.8 | 0.35 | 0.25 | TRUE |
h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.