Best TWAS P = 1.2e-10 · Best GWAS P= 4.2e-02 conditioned to 7.65e-02
| Tissue | Gene | RNA modality | RNA phenotype | h2 | # weights | Model R2 | Model R2 P | TWAS Z | TWAS P | Coloc P | Joint |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Liver | Stk40 | alternative polyA | XM_006238881.5 | 0.35 | 1150 | 0.21 | 1.9e-22 | -5.78 | 7.46e-09 | 0.04 | FALSE |
| Liver | Stk40 | alternative polyA | XM_039110152.2 | 0.38 | 1150 | 0.25 | 1.8e-27 | 6.44 | 1.20e-10 | 0.04 | TRUE |
| Liver | Stk40 | isoform ratio | NM_183056.2 | 0.42 | 1150 | 0.24 | 2.2e-26 | -5.72 | 1.07e-08 | 0.04 | FALSE |
| Liver | Stk40 | isoform ratio | XM_039110152.2 | 0.42 | 1150 | 0.29 | 1.3e-32 | 6.19 | 5.94e-10 | 0.04 | FALSE |