Hub : Traits : tautz: manual_mpc15 :

chr9:15,507,974-16,906,451

Best TWAS P=5.250556e-08 · Best GWAS P=4.090254e-08 conditioned to 1

Associated models

#	Tissue	Gene	Modality	RNA phenotype	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	Adipose	Supt3h	alternative polyA	ENSRNOT00000097089	0.05	0.05	enet	37	0.06	6.4e-07	5.3	-5.3	1.1e-07	-0.92	0.44	0.56	FALSE
2	Adipose	Supt3h	isoform ratio	ENSRNOT00000097089	0.07	0.06	blup	1700	0.06	1.9e-07	5.3	-5.4	5.3e-08	-0.93	0.36	0.64	TRUE
3	Brain	Supt3h	gene expression	ENSRNOG00000020153	0.05	0.01	blup	1704	0.03	4.4e-04	4.7	5.2	2.2e-07	0.88	0.40	0.53	FALSE
4	Liver	Supt3h	gene expression	ENSRNOG00000020153	0.03	0.02	top1	1	0.02	2.8e-03	5.3	-5.3	9.8e-08	-0.91	0.05	0.03	FALSE

h2: Heritability estimate for the given transcriptomic model. PP3: Posterior probability of two distinct causal variants. PP4: Posterior probability of a single shared causal variant. joint: Whether the RNA phenotype is in the joint model.