Hub : Traits

Bouts of movement, locomotor time 2

Number of bouts of movement during the session, when each movement bout was separated by a period of inactivity lasting 1s or longer in time2

Tags: Behavior · Locomotion

Project: u01_suzanne_mitchell

1 loci · 1 genes with independent associations · 1 total associated genes

Significant Loci

#	Chr	Start pos	End pos	# assoc genes	# joint models	Best TWAS P	Best GWAS P	Cond GWAS P	Joint genes
1	9	24497174	25018277	1	1	9.69e-08	4.77e-03	1e+00	Rims1

Pleiotropic Associations

Trait	Chi2 ratio	# genes+	# genes++	% genes++	Corr	Corr P	Genes
Right kidney weight	1.91	1	0	0	0	1e+00	Rims1
Liver weight, right	3.23	1	0	0	0	1e+00	Rims1
Indifference point function ln k	3.18	1	0	0	0	1e+00	Rims1
Indifference point function log k	3.18	1	0	0	0	1e+00	Rims1
Delay discounting water rate 12 sec	2.71	1	0	0	0	1e+00	Rims1
Delay discounting water rate 24 sec	3.19	1	0	0	0	1e+00	Rims1
Light reinforcement 1	2.11	1	0	0	0	1e+00	Rims1
Light reinforcement 2	7.69	1	0	0	0	1e+00	Rims1
Conditioned reinforcement - inactives	5.55	1	0	0	0	1e+00	Rims1
Intermitt. access day 1 inactive lever presses	15.13	1	0	0	0	1e+00	Rims1
Intermitt. access day 15 inactive lever presses	7.68	1	0	0	0	1e+00	Rims1
Intermitt. access escalation Index	4.62	1	0	0	0	1e+00	Rims1
Intermittent access total infusions	4.68	1	0	0	0	1e+00	Rims1
Lifetime Intake	4.54	1	0	0	0	1e+00	Rims1
Incentive Sensitization - Responses	8.42	1	0	0	0	1e+00	Rims1
Incentive Sensitization - Breakpoint	6.3	1	0	0	0	1e+00	Rims1
Progressive ratio test 1 active lever presses	11.71	1	0	0	0	1e+00	Rims1
Progressive ratio test 1 breakpoint	14.08	1	0	0	0	1e+00	Rims1
Progressive ratio test 2 active lever presses	14.22	1	0	0	0	1e+00	Rims1
Progressive ratio test 2 breakpoint	16.36	1	0	0	0	1e+00	Rims1
Short access day 10 total inactive lever presses	29.49	1	1	100	0	1e+00	Rims1
Short access total infusions	5.45	1	0	0	0	1e+00	Rims1
Short access day 1 locomotion	3.69	1	0	0	0	1e+00	Rims1
One hour access (0.3 mA shock)	4.85	1	0	0	0	1e+00	Rims1
Locomotion velocity, session 1	4.12	1	0	0	0	1e+00	Rims1
Locomotion velocity, session 2	3.43	1	0	0	0	1e+00	Rims1
Locomotion velocity, session 3	6.63	1	0	0	0	1e+00	Rims1
Bone: tissue strength	4.34	1	0	0	0	1e+00	Rims1
Distance traveled before self-admin	5.8	1	0	0	0	1e+00	Rims1
Distance traveled after self-admin	4.99	1	0	0	0	1e+00	Rims1
Diff in mean of infusions in LGA sessions	3.99	1	0	0	0	1e+00	Rims1
Extinction: sum of active levers before priming	27.4	1	1	100	0	1e+00	Rims1
Delta distance traveled before/after self-admin	12.16	1	0	0	0	1e+00	Rims1
Delta ambulatory time before/after self-admin	5.33	1	0	0	0	1e+00	Rims1
Time in closed arm after self-admin	7.54	1	0	0	0	1e+00	Rims1
Time to tail flick, vehicle, before self-admin	9.4	1	0	0	0	1e+00	Rims1
Time >=10cm from walls, locomotor time 1	29.01	1	1	100	0	1e+00	Rims1
Bouts of movement, locomotor time 1	5.95	1	0	0	0	1e+00	Rims1
Total resting periods, locomotor time 1	6.96	1	0	0	0	1e+00	Rims1
Vertical activity count, locomotor time 1	6.12	1	0	0	0	1e+00	Rims1
Total resting periods, locomotor time 2	30.91	1	1	100	0	1e+00	Rims1
Rest time, locomotor task time 2	4.5	1	0	0	0	1e+00	Rims1
Distance moved, locomotor task time 2	3.5	1	0	0	0	1e+00	Rims1
Locomotion in novel chamber post-restriction	5.15	1	0	0	0	1e+00	Rims1
Fe content in liver	3.29	1	0	0	0	1e+00	Rims1

Associations by panel

Tissue	RNA modality	# hits	% hits/tests	Avg chisq
Adipose	alternative polyA	0	0	1
Adipose	alternative TSS	0	0	1.09
Adipose	gene expression	0	0	1.05
Adipose	isoform ratio	0	0	1.06
Adipose	intron excision ratio	0	0	1.17
Adipose	mRNA stability	0	0	1.04
BLA	alternative polyA	0	0	1.02
BLA	alternative TSS	0	0	1.19
BLA	gene expression	0	0	1.07
BLA	isoform ratio	0	0	1.07
BLA	intron excision ratio	0	0	1.11
BLA	mRNA stability	0	0	1.06
Brain	alternative polyA	0	0	1.14
Brain	alternative TSS	0	0	1.14
Brain	gene expression	0	0	1.08
Brain	isoform ratio	0	0	1.06
Brain	intron excision ratio	0	0	1.13
Brain	mRNA stability	0	0	1.02
Eye	alternative polyA	0	0	1.29
Eye	alternative TSS	0	0	1.19
Eye	gene expression	0	0	1.07
Eye	isoform ratio	0	0	1.24
Eye	intron excision ratio	0	0	1.23
Eye	mRNA stability	0	0	1.1
IL	alternative polyA	0	0	1.01
IL	alternative TSS	0	0	1.15
IL	gene expression	0	0	1.08
IL	isoform ratio	0	0	1.16
IL	intron excision ratio	0	0	1.03
IL	mRNA stability	0	0	1.05
LHb	alternative polyA	0	0	1.02
LHb	alternative TSS	0	0	1.16
LHb	gene expression	0	0	1.09
LHb	isoform ratio	0	0	1.07
LHb	intron excision ratio	0	0	1.16
LHb	mRNA stability	0	0	1
Liver	alternative polyA	0	0	0.97
Liver	alternative TSS	0	0	1.05
Liver	gene expression	0	0	1.04
Liver	isoform ratio	0	0	1.03
Liver	intron excision ratio	0	0	1.06
Liver	mRNA stability	0	0	0.99
NAcc	alternative polyA	0	0	1.07
NAcc	alternative TSS	0	0	1.13
NAcc	gene expression	1	0	1.1
NAcc	isoform ratio	0	0	1.11
NAcc	intron excision ratio	0	0	1.14
NAcc	mRNA stability	0	0	1.15
OFC	alternative polyA	0	0	1.06
OFC	alternative TSS	0	0	1.17
OFC	gene expression	0	0	1.1
OFC	isoform ratio	0	0	1.12
OFC	intron excision ratio	0	0	1.06
OFC	mRNA stability	0	0	1.11
PL	alternative polyA	0	0	1.03
PL	alternative TSS	0	0	1.08
PL	gene expression	0	0	1.08
PL	isoform ratio	0	0	1.02
PL	intron excision ratio	0	0	1.13
PL	mRNA stability	0	0	1.06